Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885589.1_cds_XP_016439629.1_35164
CDS Infomation

[gene=LOC107765486] [db_xref=GeneID:107765486] [protein=pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like] [protein_id=XP_016439629.1] [location=complement(join(25373..25409,25577..26814,28542..28679,28767..28913,29017..29328))] [gbkey=CDS]
Sequence

ATGGAAAGGAAATTATCTTTCTCTGGGAGGAAGGATTACTTAGTCAATAGTGTGCTCGCT
CTTCCTGCTTACATGATGTCTCTTTTCCCAATTCCCGTAAAAGTTGAGAAAAGAGTGGAT
GCTTTAAGGAGGAAATTCATATGTCAAGGGAAAAAGGAGAAGAAGGCCTACAATTTGGTA
AAATGGAGCACTTTGCTAAAAAGCAAGAGGGATGGAGGTTTGGGAATCAGAAATTTGAGA
CAACATAACAAGAGTTTACTTATGAAGTGGCTATGGAGGTTTTCCCTGGAGGATCAAGCT
TTATGGAGGAAGGATTTATCAGCAATGTTAGTATCAAAAGTGGGGAATGGCAATAAAACT
TCTTTCTGGAATGATGATTGGATTGGTAATGGACCTCTTAAAGAGGTTTTTCCAGATTTG
TTCACTATAGTGCATCAGCCACAAGCTACTGTGGCTGAGGGCATCACAGAAGAAGAGGAC
AGACTTATATGGGAAAGAAACCACGAAGGAGTATATACTGTAAAGTCAGCATATGGAACC
CTAAATAGCTCTGGTCACATGAACAATGGGACATGGCACTGGAAGCACATCTGGAAGCTT
GTGGATAGGTTCAATTTACCAAATGGCTCTAGTGGATGCTTGATTTCTGCTCTTATACCA
TCGCAGATTTATGAGTGGATTACCAAGTCCAAGCATTTTGATGTATTGTCTGGAGATGTT
GCAGTCCAACTGGATTTGGTATCAAAAGCCCATGGTGTGAAAGCCGCAGAGAAGTATTTC
GCTAGCATTCCAGATAATTTAAGAACCTACCAGGTATATGGCGCTCTCTTGAACGTCTAT
GCTGATGCAAAATGCTTAAAAAAAGCAGAAGATACCATGCAAAAGCTGAAGGAGTTGGGC
TATGCTAACACCGTGGCGTACAATGTCCTGATGTCCCTTTATGCTAAAATGGGAGATCTT
GATAAGCTCAACTCACTTATGCTAGAGATGGAAGACAAGGGAATATTTGGTAACACGATT
ACCTACAATATCCTCTTAAATGCATATGCATCTGTTCCAGATGTTGAGGAGATGAAGAAG
CTTCTGATGAAAATGGAAGCTGATCCACTGGTGACTGATTGGAGTCCTTATACAGTTGCT
GCCAAGGGATACCTGAAAGCTGGTGATATAGAAAAGGCTTCCGCGGCATTGAAGTATTGC
GAGCACAAAATCAGGGGGAAAAGGGCAACGCTTGCTGTTGACATACTTCTTACTCTCTAT
ACTAGCATGGGAAAGAAAGAAGATGTGTATCGTGTATGGGATAAATACAAGAGAAGAACT
AAGAATAACAATTCAAGCTATCATTGTATGATAAGTGGACTAGAAAAGTTGGGTGATCTT
GATGGCGCAGAGAAGATATTTGCCATGTGGGAAGCAAACAGGGTACACTTTGACGTGAAT
ATTCCAAATTTGCTGATAACTGCTTACTGCAAAAAGGGTCATATGGAAAAGGCTATATCA
CTCATAGATAAACTCTTGGAGAGTGGGAAGCAGCCTAATGGGAGCACATGGAATCGTCTA
GCACTCGGTTATTGTGTACAGAACGAGATGGAGAAGGCAGTCGAGACGATGAAGAAAGCA
ATCTTGGCTAGTCGGCCAGGGTGGAAACCGCACTTCCATAGTTTCGCTTCCTGTGTGAAG
TACTTGCAATCAAAAGGAGATACTCAAAGAGAAAGAGAGCTTAAAGATTTACTTAGGGTG
CGAGGTCTCTTCCCGGAGGAATTTGAGAGGGGTCTGAAAAAGTATATTGAAATTGGAAAT
CGTATGTCTGAGGCACTTGATGAAACAAACCTTGAGCTTGCAGCTGAGTACATGTGTGTC
TGTTCTTCTTGA

Peptide Sequence

PEP ID

XP_016439629.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Nicotiana tabacum]
Sequence

MERKLSFSGRKDYLVNSVLALPAYMMSLFPIPVKVEKRVDALRRKFICQGKKEKKAYNLV
KWSTLLKSKRDGGLGIRNLRQHNKSLLMKWLWRFSLEDQALWRKDLSAMLVSKVGNGNKT
SFWNDDWIGNGPLKEVFPDLFTIVHQPQATVAEGITEEEDRLIWERNHEGVYTVKSAYGT
LNSSGHMNNGTWHWKHIWKLVDRFNLPNGSSGCLISALIPSQIYEWITKSKHFDVLSGDV
AVQLDLVSKAHGVKAAEKYFASIPDNLRTYQVYGALLNVYADAKCLKKAEDTMQKLKELG
YANTVAYNVLMSLYAKMGDLDKLNSLMLEMEDKGIFGNTITYNILLNAYASVPDVEEMKK
LLMKMEADPLVTDWSPYTVAAKGYLKAGDIEKASAALKYCEHKIRGKRATLAVDILLTLY
TSMGKKEDVYRVWDKYKRRTKNNNSSYHCMISGLEKLGDLDGAEKIFAMWEANRVHFDVN
IPNLLITAYCKKGHMEKAISLIDKLLESGKQPNGSTWNRLALGYCVQNEMEKAVETMKKA
ILASRPGWKPHFHSFASCVKYLQSKGDTQRERELKDLLRVRGLFPEEFERGLKKYIEIGN
RMSEALDETNLELAAEYMCVCSS

Transcript Sequence

Gene sequence data has not been registered.